diff --git a/backend/Pipfile.lock b/backend/Pipfile.lock index 57d51111b69cb596f26167047a8e0003193c4d85..c7409784bf69329e5cc8dd3fd3044da96e94a431 100644 --- a/backend/Pipfile.lock +++ b/backend/Pipfile.lock @@ -25,7 +25,7 @@ }, "bioapi": { "git": "https://github.com/khillion/bioapi.git", - "ref": "c1430f0668ca15bc5116337110d7a81f0621913a" + "ref": "284ce40cd007c35d4e1fbaa394717ae8c2cc6c5d" }, "certifi": { "hashes": [ @@ -411,7 +411,7 @@ "sha256:5b26757dc6f79a3b7dc9fab95359328d5747fcb2409d331ea66d0272b90ab2a0", "sha256:8b995ffe925347a2138d7ac0fe77155e4311a0ea6d6da4f5128fe4b3cbe5ed71" ], - "markers": "platform_system == 'Darwin'", + "markers": "sys_platform == 'darwin'", "version": "==0.1.0" }, "astroid": { diff --git a/backend/scripts/populate_db/import_igc_data.py b/backend/scripts/populate_db/import_igc_data.py index c95c40975524597e0ae03b7207abca2a7dfcbc10..56e325b7fcb798d393f91bce2cfcaf9c472a9f83 100755 --- a/backend/scripts/populate_db/import_igc_data.py +++ b/backend/scripts/populate_db/import_igc_data.py @@ -10,7 +10,7 @@ from bioapi import ( MetageneDBCatalogGeneAPI, MetageneDBCatalogTaxonomyAPI, MetageneDBCatalogKeggOrthologyAPI, - MetageneDBCatalogEggNogAPI, + MetageneDBCatalogEggNOGAPI, ) from requests.exceptions import HTTPError from slugify import slugify @@ -26,7 +26,7 @@ class ImportIGCGenes(object): METAGENEDB_TAXONOMY_API = MetageneDBCatalogTaxonomyAPI METAGENEDB_FUNCTION_API = MetageneDBCatalogFunctionAPI METAGENEDB_KEGG_API = MetageneDBCatalogKeggOrthologyAPI - METAGENEDB_EGGNOG_API = MetageneDBCatalogEggNogAPI + METAGENEDB_EGGNOG_API = MetageneDBCatalogEggNOGAPI PHYLUM_COL = 'taxo_phylum' GENUS_COL = 'taxo_genus'