Commits · 056c92a2452cfaa1ff88f91131e7a34b89fcd7b0 · Metagenomics / metagenedb

05 Sep, 2019 1 commit
- externalize classes to call APIs · 056c92a2
  Kenzo-Hugo Hillion authored Sep 05, 2019
  
  056c92a2
30 Aug, 2019 5 commits
- fix tests and flake8 · c5cb39cc
  Kenzo-Hugo Hillion authored Aug 30, 2019
  
  c5cb39cc
- Start testing for simple PUT to object directly · 118d26dc
  Kenzo-Hugo Hillion authored Aug 30, 2019
  
  118d26dc
- add test for creation through API for function as list or element · e8663338
  Kenzo-Hugo Hillion authored Aug 30, 2019
  
  e8663338
- fix tests · d955fc90
  Kenzo-Hugo Hillion authored Aug 30, 2019
  
  d955fc90
- finish udpate code for bulklistserializer · b9bdbc35
  Kenzo-Hugo Hillion authored Aug 30, 2019
  
  b9bdbc35
29 Aug, 2019 2 commits
- continue update method for bulklist · 0a35a932
  Kenzo-Hugo Hillion authored Aug 29, 2019
  
  0a35a932
- test creation for bulklistserializer · c439ea81
  Kenzo-Hugo Hillion authored Aug 29, 2019
  
  c439ea81
28 Aug, 2019 1 commit
- fix flake8 · a57a5807
  Kenzo-Hugo Hillion authored Aug 28, 2019
  
  a57a5807
27 Aug, 2019 5 commits
- start bulk create through API · 61c84de7
  Kenzo-Hugo Hillion authored Aug 27, 2019
  
  61c84de7
- update import scripts · 9ff69a05
  Kenzo-Hugo Hillion authored Aug 27, 2019
  
  9ff69a05
- Use API in IGC import script · 05fddb8e
  Kenzo-Hugo Hillion authored Aug 27, 2019
  
  05fddb8e
- add filter by source for functions · 1f715857
  Kenzo-Hugo Hillion authored Aug 27, 2019
  
  1f715857
- filter by rank for taxonomy · 862f5b0c
  Kenzo-Hugo Hillion authored Aug 27, 2019
  
  862f5b0c
26 Aug, 2019 7 commits
- add rank filter for taxonomy API · f93d8d0f
  Kenzo-Hugo Hillion authored Aug 26, 2019
  
  f93d8d0f
- add taxonomy and functions API · 6bb713e6
  Kenzo-Hugo Hillion authored Aug 26, 2019
  
  6bb713e6
- Use API for genes and update script · b70d190e
  Kenzo-Hugo Hillion authored Aug 26, 2019
  
  b70d190e
- Use API to create genes · 2e85bc4f
  Kenzo-Hugo Hillion authored Aug 26, 2019
  
  2e85bc4f
- Refactor script into classes and start using API · a77ffe7b
  Kenzo-Hugo Hillion authored Aug 26, 2019
  
  a77ffe7b
- Add logger to requests · 86a4744d
  Kenzo-Hugo Hillion authored Aug 26, 2019
  
  86a4744d
- make common class for API calls · 6743c3d3
  Kenzo-Hugo Hillion authored Aug 26, 2019
  
  6743c3d3
23 Aug, 2019 2 commits
- start class to contact metagenedb api · 197b32bd
  Kenzo-Hugo Hillion authored Aug 23, 2019
  
  197b32bd
- add upsert method to genes API · 77df3e6f
  Kenzo-Hugo Hillion authored Aug 23, 2019
  
  77df3e6f
22 Aug, 2019 3 commits
- Also add gene name in frontend · 3997c0ad
  Kenzo-Hugo Hillion authored Aug 22, 2019
  
  3997c0ad
- Change gene_id to slugfield · e400f19c
  Kenzo-Hugo Hillion authored Aug 22, 2019
  
  e400f19c
- Temporary remove permission for create gene · e2f7adf6
  Kenzo-Hugo Hillion authored Aug 22, 2019
  
  e2f7adf6
09 Aug, 2019 1 commit
- Merge branch '31-factory-boy-tests' into 'dev' · 1ae71133
  Kenzo-Hugo Hillion authored Aug 09, 2019
```
start using factory boy for tests

Closes #31

See merge request !11
```
  1ae71133
08 Aug, 2019 1 commit
- start using factory boy for tests · c6933a0c
  Kenzo-Hugo Hillion authored Aug 08, 2019
  
  c6933a0c
07 Aug, 2019 6 commits
- Merge branch '43-doc-swagger' into 'dev' · b0ae5b9e
  Kenzo-Hugo Hillion authored Aug 07, 2019
```
Generate Documentation for the backend API

Closes #43

See merge request !10
```
  b0ae5b9e
- change name gene_length to length · ba20e779
  Kenzo-Hugo Hillion authored Aug 07, 2019
  
  ba20e779
- create custom API documentation for gene_length endpoint · 0e823d06
  Kenzo-Hugo Hillion authored Aug 07, 2019
  
  0e823d06
- change name gene length to length · 7fb4d79e
  Kenzo-Hugo Hillion authored Aug 07, 2019
  
  7fb4d79e
- make gene length positive only · 65ee2b07
  Kenzo-Hugo Hillion authored Aug 07, 2019
  
  65ee2b07
- add basis for swagger documentation of API · 65eab49d
  Kenzo-Hugo Hillion authored Aug 07, 2019
  
  65eab49d
06 Aug, 2019 4 commits
- Merge branch 'dev' of gitlab.pasteur.fr:metagenomics/metagenedb into dev · 70c740a1
  Kenzo-Hugo Hillion authored Aug 06, 2019
  
  70c740a1
- Change status when no content for gene_length · b63f5670
  Kenzo-Hugo Hillion authored Aug 06, 2019
  
  b63f5670
- Merge branch '39-secrets-in-ci' into 'dev' · 61a1cd77
  Kenzo-Hugo Hillion authored Aug 06, 2019
```
Resolve "Create secrets for postgres from gitlab CI"

Closes #39 and #36

See merge request !9
```
  61a1cd77
- Resolve "Create secrets for postgres from gitlab CI" · 89c3e49e
  Kenzo-Hugo Hillion authored Aug 06, 2019
  
  89c3e49e
05 Aug, 2019 2 commits
- restrict deployement to dev branch · ecd074eb
  Kenzo-Hugo Hillion authored Aug 05, 2019
  
  ecd074eb
- Merge branch '40-import-taxo-genes' into 'master' · fd935b95
  Kenzo-Hugo Hillion authored Aug 05, 2019
```
Add taxonomy information to IGC genes

Closes #40

See merge request !8
```
  fd935b95