Commits · 7d8535532a67c170db81ccb8717c1c96bc52e8a0 · Metagenomics / metagenedb

19 Nov, 2019 3 commits
- add vizualization dev tool for profiling and options for script · 7d853553
  Kenzo-Hugo Hillion authored Nov 19, 2019
  
  7d853553
- fix handling of taxonomy and way it is skipped · 4a09070c
  Kenzo-Hugo Hillion authored Nov 19, 2019
  
  4a09070c
- modify handling of taxonomy · 220b598c
  Kenzo-Hugo Hillion authored Nov 19, 2019
  
  220b598c
18 Nov, 2019 1 commit
- [quick fix] allow creating gene with several KEGG from IGC · c9eb07d8
  Kenzo-Hugo Hillion authored Nov 18, 2019
  
  c9eb07d8
30 Oct, 2019 1 commit
- Deal with functions in importing IGC genes · 8f59511f
  Kenzo-Hugo Hillion authored Oct 30, 2019
  
  8f59511f
11 Sep, 2019 2 commits
- remove test breaks · e82b1b97
  Kenzo-Hugo Hillion authored Sep 11, 2019
  
  e82b1b97
- update script to import IGC genes using API · 3c3073ca
  Kenzo-Hugo Hillion authored Sep 11, 2019
  
  3c3073ca
09 Sep, 2019 1 commit
- Clean code · 8924454a
  Kenzo-Hugo Hillion authored Sep 09, 2019
  
  8924454a
05 Sep, 2019 1 commit
- externalize classes to call APIs · 056c92a2
  Kenzo-Hugo Hillion authored Sep 05, 2019
  
  056c92a2
30 Aug, 2019 1 commit
- fix tests and flake8 · c5cb39cc
  Kenzo-Hugo Hillion authored Aug 30, 2019
  
  c5cb39cc
27 Aug, 2019 2 commits
- update import scripts · 9ff69a05
  Kenzo-Hugo Hillion authored Aug 27, 2019
  
  9ff69a05
- Use API in IGC import script · 05fddb8e
  Kenzo-Hugo Hillion authored Aug 27, 2019
  
  05fddb8e
26 Aug, 2019 3 commits
- Use API for genes and update script · b70d190e
  Kenzo-Hugo Hillion authored Aug 26, 2019
  
  b70d190e
- Use API to create genes · 2e85bc4f
  Kenzo-Hugo Hillion authored Aug 26, 2019
  
  2e85bc4f
- Refactor script into classes and start using API · a77ffe7b
  Kenzo-Hugo Hillion authored Aug 26, 2019
  
  a77ffe7b
07 Aug, 2019 1 commit
- change name gene_length to length · ba20e779
  Kenzo-Hugo Hillion authored Aug 07, 2019
  
  ba20e779
05 Aug, 2019 2 commits
- Add taxonomy to Gene model · f5da1cca
  Kenzo-Hugo Hillion authored Aug 05, 2019
  
  f5da1cca
- reformat parser for IGC and add tests · 25377fe4
  Kenzo-Hugo Hillion authored Aug 05, 2019
  
  25377fe4
01 Aug, 2019 1 commit
- Replace custom insertion_model by serializers · 0f854f02
  Kenzo-Hugo Hillion authored Aug 01, 2019
  
  0f854f02
16 Jul, 2019 3 commits
- Add common class to perform insertion to DB · 2c1e3d6b
  Kenzo-Hugo Hillion authored Jul 16, 2019
  
  2c1e3d6b
- Use utils method to extract many to many fields · 61a3b8ad
  Kenzo-Hugo Hillion authored Jul 16, 2019
  
  61a3b8ad
- Refactor parsers for NCBI taxo and KEGG ko list · 170bd11b
  Kenzo-Hugo Hillion authored Jul 16, 2019
  
  170bd11b
18 Jun, 2019 2 commits
- flake8 and refacto · 5389788c
  Kenzo-Hugo Hillion authored Jun 18, 2019
  
  5389788c
- rename web to backend and change names in docker compose · a4c12af3
  Kenzo-Hugo Hillion authored Jun 18, 2019
  
  a4c12af3
17 Jun, 2019 1 commit
- add Kegg function to Gene and script to load them from API · d4cb92b0
  Kenzo-Hugo Hillion authored Jun 17, 2019
  
  d4cb92b0
12 Jun, 2019 1 commit
- remove deprecated fields used for POC · 60bb9b65
  Kenzo-Hugo Hillion authored Jun 12, 2019
  
  60bb9b65
11 Jun, 2019 1 commit
- add script to populate DB · 59aeb54a
  Kenzo-Hugo Hillion authored Jun 11, 2019
  
  59aeb54a