From 1d152b706f40dc56d4f6fc803edbe0f93d9ea98c Mon Sep 17 00:00:00 2001
From: kehillio <kenzo-hugo.hillion1@pasteur.fr>
Date: Mon, 13 May 2019 17:49:47 +0200
Subject: [PATCH] fix relative path

---
 workflows/subworkflows/graphlan_from_metaphlan2/Snakefile | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/workflows/subworkflows/graphlan_from_metaphlan2/Snakefile b/workflows/subworkflows/graphlan_from_metaphlan2/Snakefile
index c1684d1..ed2ab04 100644
--- a/workflows/subworkflows/graphlan_from_metaphlan2/Snakefile
+++ b/workflows/subworkflows/graphlan_from_metaphlan2/Snakefile
@@ -8,9 +8,9 @@ This subworkflow need to be called to be used by specifying:
 """
 
 # ==== Rule paths ==== 
-__export2graphlan_rules = config.get("rules", {}).get("export2graphlan", "../../tools/graphlan/export2graphlan/Snakefile")
-__graphlan_annotate_rules = config.get("rules", {}).get("graphlan_annotate", "../../tools/graphlan/graphlan_annotate/Snakefile")
-__graphlan_rules = config.get("rules", {}).get("graphlan", "../../tools/graphlan/graphlan/Snakefile")
+__export2graphlan_rules = config.get("rules", {}).get("export2graphlan", "../../../tools/graphlan/export2graphlan/Snakefile")
+__graphlan_annotate_rules = config.get("rules", {}).get("graphlan_annotate", "../../../tools/graphlan/graphlan_annotate/Snakefile")
+__graphlan_rules = config.get("rules", {}).get("graphlan", "../../../tools/graphlan/graphlan/Snakefile")
 
 # ---- export2graphlan
 __export2graphlan_input = __graphlan_from_metaphlan2_input
-- 
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