Commit 25277f2d authored by Kenzo-Hugo Hillion's avatar Kenzo-Hugo Hillion
Browse files

fix relative paths to tools Snakefile

parent 52c704d8
......@@ -8,9 +8,9 @@ This subworkflow need to be called to be used by specifying:
"""
# ==== Rule paths ====
__export2graphlan_rules = config.get("rules", {}).get("export2graphlan", "../../tools/metaphlan2/metaphlan2/Snakefile")
__graphlan_annotate_rules = config.get("rules", {}).get("graphlan_annotate", "../../tools/metaphlan2/metaphlan2_merge/Snakefile")
__graphlan_rules = config.get("rules", {}).get("graphlan", "../../tools/metaphlan2/metaphlan2_heatmap/Snakefile")
__export2graphlan_rules = config.get("rules", {}).get("export2graphlan", "../../tools/graphlan/export2graphlan/Snakefile")
__graphlan_annotate_rules = config.get("rules", {}).get("graphlan_annotate", "../../tools/graphlan/graphlan_annotate/Snakefile")
__graphlan_rules = config.get("rules", {}).get("graphlan", "../../tools/graphlan/graphlan/Snakefile")
# ---- export2graphlan
__export2graphlan_input = __graphlan_from_metaphlan2_input
......
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