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Metagenomics
snakemake
Commits
25277f2d
Commit
25277f2d
authored
May 13, 2019
by
Kenzo-Hugo Hillion
♻
Browse files
fix relative paths to tools Snakefile
parent
52c704d8
Changes
1
Show whitespace changes
Inline
Side-by-side
workflows/subworkflows/graphlan_from_metaphlan2/Snakefile
View file @
25277f2d
...
...
@@ -8,9 +8,9 @@ This subworkflow need to be called to be used by specifying:
"""
# ==== Rule paths ====
__export2graphlan_rules = config.get("rules", {}).get("export2graphlan", "../../tools/
met
aphlan
2/met
aphlan
2
/Snakefile")
__graphlan_annotate_rules = config.get("rules", {}).get("graphlan_annotate", "../../tools/
met
aphlan
2/met
aphlan
2_merg
e/Snakefile")
__graphlan_rules = config.get("rules", {}).get("graphlan", "../../tools/
met
aphlan
2/met
aphlan
2_heatmap
/Snakefile")
__export2graphlan_rules = config.get("rules", {}).get("export2graphlan", "../../tools/
gr
aphlan
/export2gr
aphlan/Snakefile")
__graphlan_annotate_rules = config.get("rules", {}).get("graphlan_annotate", "../../tools/
gr
aphlan
/gr
aphlan
_annotat
e/Snakefile")
__graphlan_rules = config.get("rules", {}).get("graphlan", "../../tools/
gr
aphlan
/gr
aphlan/Snakefile")
# ---- export2graphlan
__export2graphlan_input = __graphlan_from_metaphlan2_input
...
...
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