From 7af20a4c8c05af89f46aad6781b9ea8f1d7c55ed Mon Sep 17 00:00:00 2001
From: kehillio <kenzo-hugo.hillion1@pasteur.fr>
Date: Mon, 13 May 2019 18:14:55 +0200
Subject: [PATCH] fix typo in Snakefiles
---
tools/graphlan/export2graphlan/Snakefile | 4 ++--
tools/graphlan/graphlan_annotate/Snakefile | 4 ++--
2 files changed, 4 insertions(+), 4 deletions(-)
diff --git a/tools/graphlan/export2graphlan/Snakefile b/tools/graphlan/export2graphlan/Snakefile
index 3377b9c..448fcf0 100644
--- a/tools/graphlan/export2graphlan/Snakefile
+++ b/tools/graphlan/export2graphlan/Snakefile
@@ -6,9 +6,9 @@ rule export2graphlan:
__export2graphlan_input
output:
tree = __export2graphlan_output_tree,
- annot = __export2graphlan_output_annot
+ annot = __export2graphlan_output_annotation
params:
exec_command = __export2graphlan_exec_command,
options = __export2graphlan_options
shell:
- "{params.exec_command} {params.options} -i {input} -tree {output.tree} --annotation {output.annot}"
+ "{params.exec_command} {params.options} -i {input} --tree {output.tree} --annotation {output.annot}"
diff --git a/tools/graphlan/graphlan_annotate/Snakefile b/tools/graphlan/graphlan_annotate/Snakefile
index c7aa660..6a1b117 100644
--- a/tools/graphlan/graphlan_annotate/Snakefile
+++ b/tools/graphlan/graphlan_annotate/Snakefile
@@ -3,8 +3,8 @@ __graphlan_annotate_options = config['graphlan_annotate'].get('options', "")
rule graphlan_annotate:
input:
- tree = __graphlan_annotate_input_tree
- annot = __graphlan_annotate_input_annot
+ tree = __graphlan_annotate_input_tree,
+ annot = __graphlan_annotate_input_annotation
output:
__graphlan_annotate_output
params:
--
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