diff --git a/tests/test_core.py b/tests/test_core.py index 90f8c90b5cfc2f06a32136a8980109b1ddd4f0ad..3a721c69ecf9b11a06b8af1a4e760bd54ef90bd0 100644 --- a/tests/test_core.py +++ b/tests/test_core.py @@ -132,7 +132,8 @@ def test_output_results(capsys, tmpdir): fmt = "csv" quiet = True verbose = 0 - core.output_results(str(output_file), all_seq_digested, fmt, quiet, verbose) + core.output_results(str(output_file), all_seq_digested, fmt, quiet, + verbose) out, err = capsys.readouterr() # Quiet assert out == "" @@ -152,7 +153,8 @@ def test_output_results(capsys, tmpdir): fmt = "csv" quiet = False verbose = 3 - core.output_results(str(output_file), all_seq_digested, fmt, quiet, verbose) + core.output_results(str(output_file), all_seq_digested, fmt, quiet, + verbose) out, err = capsys.readouterr() assert output_file.read() == "Original_header,No_peptide,Enzyme,Cleaving_"\ "pos,Peptide_size,Peptide_mass,pI,Sequence\n"\ @@ -201,8 +203,8 @@ def test_peptide(): format_res = pep0.__format__("csv") assert format_res == "Test,1,fake_enzyme,3,8,1012.98488,3.29,QWSDESDF" format_res = pep2.__format__("tsv") - assert format_res == "Test\t1\tfake_enzyme\t2\t8\t1012.98488\t3.29\tQWSDES"\ - "DF" + assert format_res == "Test\t1\tfake_enzyme\t2\t8\t1012.98488\t3.29\tQWSD"\ + "ESDF" format_res = pep3.__format__("fasta") assert format_res == ">Test_2_fake_enzyme_3_8_1012.98488_3.29\nQWSDESDF"