Commits · master · Rayan CHIKHI / serratus-batch-assembly

26 Feb, 2021 1 commit
- added epsy genome structure for segments 1 and 2 · d3bbeb54
  Rayan CHIKHI authored Feb 26, 2021
  
  d3bbeb54
13 Feb, 2021 1 commit
- cost-optimizing future batch jobs · 87202aa3
  Rayan CHIKHI authored Feb 13, 2021
  
  87202aa3
07 Feb, 2021 1 commit
- some cleanup · cba058ea
  Rayan CHIKHI authored Feb 07, 2021
  
  cba058ea
06 Feb, 2021 2 commits
- important batch fix (wrong docker volume was allocated: xvda instead of xvdcz,... · 277f581c
  Rayan CHIKHI authored Feb 06, 2021
```
important batch fix (wrong docker volume was allocated: xvda instead of xvdcz, thanks AWS engineers for pointing this out
```
  277f581c
- add missing file · 6ef42c37
  Rayan CHIKHI authored Feb 06, 2021
  
  6ef42c37
04 Feb, 2021 1 commit
- some attempt at cleaning up that folder · 1ec14ecb
  Rayan CHIKHI authored Feb 04, 2021
  
  1ec14ecb
03 Feb, 2021 2 commits
- missing files · 5195a52b
  Rayan CHIKHI authored Feb 03, 2021
  
  5195a52b
- various script changes · 36e14053
  Rayan CHIKHI authored Feb 03, 2021
  
  36e14053
01 Feb, 2021 2 commits
- various robustness fixes attempts · 01fee95f
  Rayan CHIKHI authored Feb 01, 2021
  
  01fee95f
- minor but essential fix · 027b388d
  Rayan CHIKHI authored Jan 31, 2021
  
  027b388d
31 Jan, 2021 1 commit
- reorganize submit jobs · 8bfeca98
  Rayan CHIKHI authored Jan 31, 2021
  
  8bfeca98
18 Jan, 2021 2 commits
- lovelywater migration · 4ddbebdd
  Rayan authored Jan 18, 2021
  
  4ddbebdd
- additional scripts · 603467b7
  Rayan authored Jan 18, 2021
  
  603467b7
12 Jan, 2021 1 commit
- get scaffolds from centroids · 00dcf505
  Rayan authored Jan 12, 2021
  
  00dcf505
22 Dec, 2020 1 commit
- dicistro pathracer graph · 38cf3e90
  Rayan authored Dec 22, 2020
  
  38cf3e90
21 Dec, 2020 2 commits
- updated dicistro analysis · 1ef7ebf4
  Rayan authored Dec 21, 2020
  
  1ef7ebf4
- dicistro clustering script · a0972f5e
  Rayan authored Dec 21, 2020
  
  a0972f5e
20 Dec, 2020 4 commits
- pathracer graph on quenya · 8f3e24d4
  Rayan authored Dec 20, 2020
  
  8f3e24d4
- housekeeping · c758d2dd
  Rayan authored Dec 20, 2020
  
  c758d2dd
- Merge branch 'master' of gitlab.pasteur.fr:rchikhi_pasteur/serratus-batch-assembly · face4a51
  Rayan CHIKHI authored Dec 20, 2020
  
  face4a51
- added quenya rdrps · 237e038f
  Rayan CHIKHI authored Dec 20, 2020
  
  237e038f
12 Dec, 2020 4 commits
- bugfixes · f3f09487
  Rayan authored Dec 12, 2020
  
  f3f09487
- quenya rdrp · f6d417af
  Rayan authored Dec 11, 2020
  
  f6d417af
- dicistro · a26d7b05
  Rayan authored Dec 11, 2020
  
  a26d7b05
- dicistro bis · a89f00ba
  Rayan authored Dec 11, 2020
  
  a89f00ba
11 Dec, 2020 4 commits
- added rdrp · 5edf6074
  Rayan CHIKHI authored Dec 11, 2020
  
  5edf6074
- dicistro · 58530c0d
  Rayan authored Dec 11, 2020
  
  58530c0d
- dicistro aa · 91209580
  Rayan CHIKHI authored Dec 11, 2020
  
  91209580
- quenya assemblies · 9071b0b6
  Rayan authored Dec 11, 2020
  
  9071b0b6
10 Dec, 2020 2 commits
- added quenya aa · 0f363e09
  Rayan CHIKHI authored Dec 10, 2020
  
  0f363e09
- merge & update cs · 23077326
  Rayan authored Dec 10, 2020
  
  23077326
07 Sep, 2020 4 commits
- list of sat · 961a882e
  Rayan CHIKHI authored Sep 07, 2020
  
  961a882e
- genericity of coronaspades.py for satellite · 4ce47d29
  Rayan authored Sep 07, 2020
  
  4ce47d29
- sat submit script · 5e8d3835
  Rayan CHIKHI authored Sep 07, 2020
  
  5e8d3835
- added satellite code · 1802a76b
  Rayan CHIKHI authored Sep 07, 2020
  
  1802a76b
18 Aug, 2020 1 commit
- added some uncommitted stuff before shutting down ec2 · 9c686a28
  Rayan authored Aug 18, 2020
  
  9c686a28
04 Aug, 2020 4 commits
- Merge branch 'master' of gitlab.pasteur.fr:rchikhi_pasteur/serratus-batch-assembly · 8d314cea
  Rayan CHIKHI authored Aug 04, 2020
  
  8d314cea
- added PsNV in plot · 762d1baf
  Rayan CHIKHI authored Aug 04, 2020
  
  762d1baf
- added genome structure of GB genomes too, and also, added PsNV · 49cb668e
  Rayan authored Aug 04, 2020
  
  49cb668e
- just a deleted file · ff0a29c5
  Rayan CHIKHI authored Aug 04, 2020
  
  ff0a29c5