From 8cbbde4df6c4f2e57c193563146f8c55b3417548 Mon Sep 17 00:00:00 2001
From: Ben Webb <ben@salilab.org>
Date: Fri, 17 Apr 2020 09:48:25 -0700
Subject: [PATCH] Match latest PMI ProtocolOutput interface
PMI's ProtocolOutput class dropped support for PMI1,
so update to match the new API.
---
pyext/src/restraint.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/pyext/src/restraint.py b/pyext/src/restraint.py
index 02e1a18..5a0b343 100755
--- a/pyext/src/restraint.py
+++ b/pyext/src/restraint.py
@@ -119,7 +119,7 @@ class GaussianEMRestraintWrapper(object):
ms=IMP.atom.Mass(p).get_mass()
IMP.atom.Mass(p).set_mass(ms*scale)
- for p, state in IMP.pmi.tools._all_protocol_outputs([], densities[0]):
+ for p, state in IMP.pmi.tools._all_protocol_outputs(densities[0]):
p.add_em3d_restraint(state, self.target_ps, self.densities, self)
# setup model GMM
--
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