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recursive-gmconvert
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Riccardo PELLARIN
recursive-gmconvert
Commits
f4f18670
Commit
f4f18670
authored
Mar 05, 2018
by
samuel hanot
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fix missing $
parent
880b7b59
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get_maps.sh
get_maps.sh
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get_maps.sh
View file @
f4f18670
...
...
@@ -12,7 +12,7 @@ do
rsync
-a
-v
-z
--delete
rsync.ebi.ac.uk::pub/databases/emdb/structures/EMD-
${
f
}
/
$f
cd
$f
curl http://www.ebi.ac.uk/pdbe/entry/emdb/EMD-
$f
/analysis
>
header/map_analysis.html
cutoff
=
$(
awk
'/contour/{print
3
}'
< header/map_analysis.html
)
cutoff
=
$(
awk
'/contour/{print
$4
}'
< header/map_analysis.html
)
resolution
=
$(
sed
-ne
's/[<>/ ]//g'
-ne
's/resolutionByAuthor//gp'
header/emd-
${
f
}
.xml
)
echo
${
cutoff
}
>
cutoff.txt
echo
${
resolution
}
>
resolution.txt
...
...
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