From ff1dcd13eb26d91d76db1cdc83b6e6122f3f2715 Mon Sep 17 00:00:00 2001 From: Vincent LAVILLE <vincent.laville@pasteur.fr> Date: Tue, 21 Nov 2017 10:59:33 +0100 Subject: [PATCH] Updated doc --- .Rbuildignore | 4 +++- R/varFrac.R | 6 +++++- 2 files changed, 8 insertions(+), 2 deletions(-) diff --git a/.Rbuildignore b/.Rbuildignore index 69460be..ecdf579 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -2,4 +2,6 @@ VarExp.Rproj code-of-conduct.md README.html README.md -README.Rmd \ No newline at end of file +README.Rmd +^.*\.Rproj$ +^\.Rproj\.user$ diff --git a/R/varFrac.R b/R/varFrac.R index f03faa5..6f9c860 100644 --- a/R/varFrac.R +++ b/R/varFrac.R @@ -1,4 +1,8 @@ -#' Make sure +#' Make sure SNPs in the input file and SNPs included +#' in the correlation matrix are the same. +#' +#'This step is necessary because some SNPs in the input may be not +#'found in the reference panel or excluded from the matrix after the pruning step. #' #' @param df is the meta-analysis results data frame #' @param v is a vector of SNP identifiers -- GitLab