From 22aee8ee6e49841b7fd8ad7872c67362a2f86dfe Mon Sep 17 00:00:00 2001 From: Hubble <hubble@HubbledeMacBook-Pro.local> Date: Thu, 30 May 2024 14:51:06 +0200 Subject: [PATCH] GWAS description add Nsample, Ncase and Ncontrol --- doc/source/data_import.rst | 16 ++++++++-------- 1 file changed, 8 insertions(+), 8 deletions(-) diff --git a/doc/source/data_import.rst b/doc/source/data_import.rst index 00aa2d3e..c8630ef6 100644 --- a/doc/source/data_import.rst +++ b/doc/source/data_import.rst @@ -16,14 +16,14 @@ GWAS description This file that must contain the following columns and tab-separated: -+-------------+----------+-------------------+--------------+--------------------+-----------------+-------------+--------------------+ -| Consortium | Outcome | FullName | Type | Reference | ReferenceLink | dataLink | internalDataLink | -+=============+==========+===================+==============+====================+=================+=============+====================+ -| GIANT | HIP | Hip Circumference | Anthropometry| Shungin et al. 2015| url to reference| url to data | local path to data | -+-------------+----------+-------------------+--------------+--------------------+-----------------+-------------+--------------------+ - -The Consortium and outcome names must correspond to the name of the summary statistic files and covariance columns. The last four columns -can be left blank if the user doesn't want to run JASS on a server. ++-------------+----------+-------------------+--------------+--------------------+--------------------+--------------------+--------------------+-----------------+-------------+--------------------+ +| Consortium | Outcome | FullName | Type | Nsample | Ncase | Ncontrol | Reference | ReferenceLink | dataLink | internalDataLink | ++=============+==========+===================+==============+====================+====================+====================+====================+=================+=============+====================+ +| GIANT | HIP | Hip Circumference | Anthropometry| 142762 | | | Shungin et al. 2015| url to reference| url to data | local path to data | ++-------------+----------+-------------------+--------------+--------------------+--------------------+--------------------+--------------------+-----------------+-------------+--------------------+ + +The Consortium and outcome names must correspond to the name of the summary statistic files and covariance columns. Nsample, Ncase and Ncontrol can be left blank. The last four columns +can also be left blank if the user doesn't want to run JASS on a server. GWAS results files ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -- GitLab