<h1class="main_title"> Joint Analysis of Summary Statistics </h1>
<pclass="text-justify">
<pclass="main-intro">
The JASS web interface efficiently compute multi-trait genome-wide association study (GWAS) and enable user to interacively explore results.
JASS can increase statistical power by leveraging pleiotropy, but also can deepen our understanding of SNPs functional effect (for a detailed explanation see the citation box below).
Currently this website host {{initmeta.nb_phenotypes}} traits available for analysis with the omnibus test.
Currently this website host <b>{{initmeta.nb_phenotypes}} traits </b>available for analysis with the omnibus test.
All GWAS have been pre-processed using the <ahref="https://gitlab.pasteur.fr/statistical-genetics/jass_suite_pipeline">JASS pre-processing pipeline</a> and imputation of missing statistics has been conducted using the <ahref="https://gitlab.pasteur.fr/statistical-genetics/raiss">RAISS software</a>, resulting in a total of {{initmeta.nb_snps}} SNPs available for analysis.
To analyze data in your own facility and/or access supplementary joint analysis tests, please download and install the JASS python package.
</p>
<v-containerfluid>
<v-containerfluid>
<v-rowdense>
<AnalysisCardv-for="analysis in analysis"v-bind:key="analysis.title"v-bind:title="analysis.title"v-bind:description="analysis.description"v-bind:short_desc="analysis.short_desc"v-bind:link="analysis.link"/>
<AnalysisCardv-for="analysis in analysis":key="analysis.title":title="analysis.title":description="analysis.description":short_desc="analysis.short_desc":link="analysis.link":myStyle="analysis.myStyle":myClass="analysis.myClass"/>
</v-row>
</v-container>
<h2> About </h2>
...
...
@@ -65,13 +65,21 @@ export default {
title:'Genome wide Analysis',
description:'Run JASS on a set of traits genome wide, Explore result interactively and download results summary or full genome wide results. Can take up to ~30 to run depending on the number of trait selected.',
short_desc:'Run Genome Wide Analysis',
link:'/phenotypes'
link:'/phenotypes',
myStyle:{
backgroundColor:'#2D96FA',
},
myClass:'left-card',
},
{
title:'Region Analysis',
description:'Run JASS on a region of interest, Explore results interactively and export them to csv files. This analysis is limited to one chromosome and will run faster than genome wide analysis.',