diff --git a/doc/source/data_import.rst b/doc/source/data_import.rst index 00aa2d3eac553d5ea9a79fb670c7d8d16138cafb..c8630ef69d787f7905102fa0c8401dc2443c23a1 100644 --- a/doc/source/data_import.rst +++ b/doc/source/data_import.rst @@ -16,14 +16,14 @@ GWAS description This file that must contain the following columns and tab-separated: -+-------------+----------+-------------------+--------------+--------------------+-----------------+-------------+--------------------+ -| Consortium | Outcome | FullName | Type | Reference | ReferenceLink | dataLink | internalDataLink | -+=============+==========+===================+==============+====================+=================+=============+====================+ -| GIANT | HIP | Hip Circumference | Anthropometry| Shungin et al. 2015| url to reference| url to data | local path to data | -+-------------+----------+-------------------+--------------+--------------------+-----------------+-------------+--------------------+ - -The Consortium and outcome names must correspond to the name of the summary statistic files and covariance columns. The last four columns -can be left blank if the user doesn't want to run JASS on a server. ++-------------+----------+-------------------+--------------+--------------------+--------------------+--------------------+--------------------+-----------------+-------------+--------------------+ +| Consortium | Outcome | FullName | Type | Nsample | Ncase | Ncontrol | Reference | ReferenceLink | dataLink | internalDataLink | ++=============+==========+===================+==============+====================+====================+====================+====================+=================+=============+====================+ +| GIANT | HIP | Hip Circumference | Anthropometry| 142762 | | | Shungin et al. 2015| url to reference| url to data | local path to data | ++-------------+----------+-------------------+--------------+--------------------+--------------------+--------------------+--------------------+-----------------+-------------+--------------------+ + +The Consortium and outcome names must correspond to the name of the summary statistic files and covariance columns. Nsample, Ncase and Ncontrol can be left blank. The last four columns +can also be left blank if the user doesn't want to run JASS on a server. GWAS results files ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~