jass merge requestshttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests2022-04-21T10:37:23+02:00https://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/53Merge dev-fastapi-merging-dev into dev-fastapi2022-04-21T10:37:23+02:00Bryan BRANCOTTEMerge dev-fastapi-merging-dev into dev-fastapiBryan BRANCOTTEBryan BRANCOTTEhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/52Bring all changes from dev into master2022-04-21T11:02:57+02:00Bryan BRANCOTTEBring all changes from dev into masterBryan BRANCOTTEBryan BRANCOTTEhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/51merge fast-api into dev2022-04-21T10:46:19+02:00Bryan BRANCOTTEmerge fast-api into devBryan BRANCOTTEBryan BRANCOTTEhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/50Add gene cov into test data2022-04-13T14:12:06+02:00Bryan BRANCOTTEAdd gene cov into test dataBryan BRANCOTTEBryan BRANCOTTEhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/49move projects into a dedicated folder2022-04-06T14:12:31+02:00Bryan BRANCOTTEmove projects into a dedicated folderBryan BRANCOTTEBryan BRANCOTTEhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/48Draft: Dev fastapi k8s yarn start2022-04-07T12:59:56+02:00Bryan BRANCOTTEDraft: Dev fastapi k8s yarn startBryan BRANCOTTEBryan BRANCOTTEhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/47Dev fastapi k8s fixing tests2022-03-31T16:33:34+02:00Bryan BRANCOTTEDev fastapi k8s fixing testsBryan BRANCOTTEBryan BRANCOTTEhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/46Draft: Dev fastapi k8s fixing tests2022-03-31T16:07:40+02:00Bryan BRANCOTTEDraft: Dev fastapi k8s fixing testsBryan BRANCOTTEBryan BRANCOTTEhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/45Deploy app in kubernetes2022-04-20T18:28:37+02:00Bryan BRANCOTTEDeploy app in kubernetes * k8s deployment with data in a shared pvc
* fix python test
* `jass serve` run FastAPI/starlette to serve both API and generated frontend (user have to yarn generate the client)
* various work around the docker-compose
* configurab... * k8s deployment with data in a shared pvc
* fix python test
* `jass serve` run FastAPI/starlette to serve both API and generated frontend (user have to yarn generate the client)
* various work around the docker-compose
* configurable the backend used b the client with env var
*https://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/44modify backend requirements to require fastapi stack2022-03-09T18:56:16+01:00Hanna JULIENNEmodify backend requirements to require fastapi stacki.e. FastAPI, pydantic, uvicorni.e. FastAPI, pydantic, uvicornhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/43Correct phenotype 'type' property undefined in the API2022-03-02T14:25:24+01:00Hanna JULIENNECorrect phenotype 'type' property undefined in the APImerge improvement of zscore based H0 covaraiance matrix and max allele length fixmerge improvement of zscore based H0 covaraiance matrix and max allele length fixhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/42[WIP - do not merge for now] modify docker-compose to use the nuxtjs client2022-04-21T10:46:19+02:00Hervé MENAGER[WIP - do not merge for now] modify docker-compose to use the nuxtjs clientjust fire up docker-compose and connect to localhost:3000 ;)just fire up docker-compose and connect to localhost:3000 ;)Hervé MENAGERHervé MENAGERhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/41merge new docker image branch2021-11-19T08:22:46+01:00Hervé MENAGERmerge new docker image branchmodifications are mostly related to running jass in docker with a more recent linux and pythonmodifications are mostly related to running jass in docker with a more recent linux and pythonHervé MENAGERHervé MENAGERhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/40update new-docker-image with latest dev-nuxt developments2021-11-16T16:27:14+01:00Hervé MENAGERupdate new-docker-image with latest dev-nuxt developmentshttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/39Dev rachel2021-11-09T11:19:13+01:00RachelDev rachelhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/38Recup dev from Pierre2021-11-19T09:42:01+01:00RachelRecup dev from PierreHi Pierre,
I would like to merge your dev into my branch to work on the pages that I missed.
ThanksHi Pierre,
I would like to merge your dev into my branch to work on the pages that I missed.
Thankshttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/37Draft: Dev cnerin2023-09-07T15:15:21+02:00Cyril NERINDraft: Dev cnerinCyril NERINCyril NERINhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/36Dev cnerin2021-07-30T16:03:42+02:00Cyril NERINDev cnerinCyril NERINCyril NERINhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/35Replace Connexion by flask-smorest2021-07-26T16:17:09+02:00Hanna JULIENNEReplace Connexion by flask-smorestSpecify branch in connexion URL, as advocated in https://github.com/pypa/pip/issues/3610#issuecomment-283578756Specify branch in connexion URL, as advocated in https://github.com/pypa/pip/issues/3610#issuecomment-283578756Hanna JULIENNEHanna JULIENNEhttps://gitlab.pasteur.fr/statistical-genetics/jass/-/merge_requests/34Replace connexion by flask-smorest2021-07-26T15:59:43+02:00Hanna JULIENNEReplace connexion by flask-smorestSpecify branch in connexion URL, as advocated in https://github.com/pypa/pip/issues/3610#issuecomment-283578756Specify branch in connexion URL, as advocated in https://github.com/pypa/pip/issues/3610#issuecomment-283578756Hanna JULIENNEHanna JULIENNE