From b13fe091da8bf917251f1ccc6006f14327ec12a5 Mon Sep 17 00:00:00 2001
From: Hanna  JULIENNE <hanna.julienne@pasteur.fr>
Date: Thu, 9 Jan 2025 18:30:12 +0100
Subject: [PATCH] Fixed beta_or_Z column name

---
 jass_preprocessing/compute_score.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/jass_preprocessing/compute_score.py b/jass_preprocessing/compute_score.py
index 7e026c0..1a1217a 100644
--- a/jass_preprocessing/compute_score.py
+++ b/jass_preprocessing/compute_score.py
@@ -30,7 +30,7 @@ def compute_z_score(mgwas):
         
         mgwas.loc[mgwas["computed_z"].isin([np.inf]), 'computed_z'] = mgwas["z"]
 
-    elif 'beta' in mgwas.columns:
+    elif 'beta_or_Z' in mgwas.columns:
         sign_vect = np.sign(mgwas.beta)
         mgwas["computed_z"] = mgwas["computed_z"].replace(np.inf, 37.537836095576054)
     else:
-- 
GitLab