diff --git a/jass_pipeline.nf b/jass_pipeline.nf index 763a62df596e42eb85078de589720b3400933f37..7bad6f3a0cdc6f1a97c9f493c1b0304e2c2c264f 100644 --- a/jass_pipeline.nf +++ b/jass_pipeline.nf @@ -109,7 +109,7 @@ process Impute_GWAS { input: path gwas_files from cleaned_gwas_chr_channel path ref_file from Channel.fromPath(ref_chr_path).collect() - path ld_file from Channel.fromPath(param.ld_folder).collect() + path ld_file from Channel.fromPath(params.ld_folder).collect() output: path "imputed_GWAS/*.txt" into imputed_gwas_channel path "imputed_GWAS/*.txt" into imputed_gwas_channel2