diff --git a/README.md b/README.md index 1b299659998e937a22057e7e17132ba717fd50ee..f8ffce5e26de38e30f16e036a6911124911c08a7 100644 --- a/README.md +++ b/README.md @@ -96,6 +96,7 @@ See JASS documentation for its usage (https://statistical-genetics.pages.pasteur For this step you will need to install an additional dependency [RAISS](https://gitlab.pasteur.fr/statistical-genetics/raiss) python package. +* --compute_imputation=true : the imputation step will be performed * --ref_panel : A folder containing a Reference Panel in the .bim, .bed, .fam format for imputation with RAISS * --ld-folder : A path toward a folder containing LD matrices (that can be generated from the reference panel with the raiss package as described here : http://statistical-genetics.pages.pasteur.fr/raiss/#precomputation-of-ld-correlation)