diff --git a/bin/make_heatmap.R b/bin/make_heatmap.R index f76d419f171a6f07667a229ea449c5e441d9f689..4f4eb60a265bb463e57b80f25a4dc83daa0748b5 100644 --- a/bin/make_heatmap.R +++ b/bin/make_heatmap.R @@ -23,6 +23,12 @@ setkey(trait_name, "ID") Rho = fread(correlation_file) setkey(Rho, "V1") +D = as.matrix(1-Rho[,-1]) +D[is.na(D)] = 0 +h = hclust(as.dist(D)) +order_trait <- trait_name$ID[h$order] + + Pval = fread(p_file) setkey(Pval, "V1")