Commits · master · Statistical-Genetics / JASS_suite_pipeline

03 Feb, 2023 2 commits
- typo in param · 48df1edc
  Hanna JULIENNE authored Feb 03, 2023
  
  48df1edc
- removed glob pattern in preambule · 97d21fae
  Hanna JULIENNE authored Feb 03, 2023
  
  97d21fae
01 Feb, 2023 1 commit
- added the flag to compute imputation to the doc · c08fac16
  Hanna JULIENNE authored Feb 01, 2023
  
  c08fac16
19 Jan, 2023 4 commits
- specify version of nextflow to avoid issue when DSL1 is sunsetted · 54c84bee
  hjulienn authored Jan 19, 2023
  
  54c84bee
- added date tag to the inittable name · adf0c0b0
  hjulienn authored Jan 19, 2023
  
  adf0c0b0
- adding config to tutorial command · 9759f1ce
  hjulienn authored Jan 19, 2023
  
  9759f1ce
- merge pipeline ancestry into master · 4f3ede40
  hjulienn authored Jan 19, 2023
  
  4f3ede40
18 Jan, 2023 7 commits
- improved doc · be3e61b2
  Hanna JULIENNE authored Jan 18, 2023
  
  be3e61b2
- update conf+README · ccdcb7e9
  Hanna JULIENNE authored Jan 18, 2023
  
  ccdcb7e9
- resolve conflict in pipeline · e214a50d
  Hanna JULIENNE authored Jan 18, 2023
  
  e214a50d
- resolve conflict in readme · b6acf71b
  Hanna JULIENNE authored Jan 18, 2023
  
  b6acf71b
- version for local run · 69a2ae4f
  Hanna JULIENNE authored Jan 18, 2023
  
  69a2ae4f
- retrieve all LDscore info · 4e8c7d1f
  Hanna JULIENNE authored Jan 18, 2023
  
  4e8c7d1f
- fixed covariance parser · b367af00
  Hanna JULIENNE authored Jan 18, 2023
  
  b367af00
17 Jan, 2023 14 commits
- running version without LDSC+readme update · 1e9f87b9
  Hanna JULIENNE authored Jan 17, 2023
  
  1e9f87b9
- change path · 64379977
  Hanna JULIENNE authored Jan 17, 2023
  
  64379977
- change path · dbf50794
  Hanna JULIENNE authored Jan 17, 2023
  
  dbf50794
- remove all selectors · b3c2ceb7
  Hanna JULIENNE authored Jan 17, 2023
  
  b3c2ceb7
- remove selector in config · bf820688
  Hanna JULIENNE authored Jan 17, 2023
  
  bf820688
- add heritability to config · 301dea9d
  Hanna JULIENNE authored Jan 17, 2023
  
  301dea9d
- remove space · d3e186e4
  Hanna JULIENNE authored Jan 17, 2023
  
  d3e186e4
- correct typo · 051adbc9
  Hanna JULIENNE authored Jan 17, 2023
  
  051adbc9
- add test data EAD · 520bc0ca
  Hanna JULIENNE authored Jan 17, 2023
  
  520bc0ca
- add meta data EAS test · ec799a85
  Hanna JULIENNE authored Jan 17, 2023
  
  ec799a85
- add config for tests · b5caae3a
  Hanna JULIENNE authored Jan 17, 2023
  
  b5caae3a
- add ref panel for example · f1540237
  Hanna JULIENNE authored Jan 17, 2023
  
  f1540237
- cleaned reference panels · 2b1cc5a6
  Hanna JULIENNE authored Jan 17, 2023
  
  2b1cc5a6
- adding an heritability estimation process · bc9e68c5
  Hanna JULIENNE authored Jan 17, 2023
  
  bc9e68c5
06 Jan, 2023 1 commit
- continuing doc + maintenance · 88640673
  Hanna JULIENNE authored Jan 06, 2023
  
  88640673
05 Jan, 2023 1 commit
- first running version on local machine · e1e0dbeb
  Hanna JULIENNE authored Jan 05, 2023
  
  e1e0dbeb
04 Jan, 2023 3 commits
- added reference panel for hg38 · b1bce138
  hjulienn authored Jan 04, 2023
  
  b1bce138
- continuing cleaning · dbd5f4e7
  hjulienn authored Jan 04, 2023
  
  dbd5f4e7
- add reference panel for AFR · 561661a6
  hjulienn authored Jan 04, 2023
  
  561661a6
03 Jan, 2023 2 commits
- continuing cleaning · b8341ab9
  Hanna JULIENNE authored Jan 03, 2023
  
  b8341ab9
- a bit of cleaning+ test git lfs (tracking for large files) · fd122dba
  Hanna JULIENNE authored Jan 03, 2023
  
  fd122dba
07 Nov, 2022 1 commit
- Removed obsolete parameter in clean GWAS process · 6231f686
  Hanna JULIENNE authored Nov 07, 2022
  
  6231f686
20 Jul, 2022 2 commits
- fixed folder path · 181ac15e
  Hanna JULIENNE authored Jul 20, 2022
  
  181ac15e
- update parser to retrieve standard deviation and p value · abe486b5
  Hanna JULIENNE authored Jul 20, 2022
  
  abe486b5
09 May, 2022 2 commits
- New LD Regions · 9a26844d
  Lucie TROUBAT authored May 09, 2022
  
  9a26844d
- New LD Regions · 4f80a141
  Lucie TROUBAT authored May 09, 2022
  
  4f80a141