From 5cfcaf278297339402d6fd1bee54b3d933a39d53 Mon Sep 17 00:00:00 2001
From: Yuka Suzuki <yuka.suzuki@pasteur.fr>
Date: Mon, 15 Jan 2024 11:23:27 +0100
Subject: [PATCH] removed two read_csv lines that are not necessary

---
 Regression_analysis/scripts/5f-cross_validation_linear.py | 4 ----
 1 file changed, 4 deletions(-)

diff --git a/Regression_analysis/scripts/5f-cross_validation_linear.py b/Regression_analysis/scripts/5f-cross_validation_linear.py
index c485f73..90886a2 100644
--- a/Regression_analysis/scripts/5f-cross_validation_linear.py
+++ b/Regression_analysis/scripts/5f-cross_validation_linear.py
@@ -42,10 +42,6 @@ cor_p_train = []
 cor_p_val = []
 df_jass_all = pd.DataFrame()
 for i in [2,3,4,5,6]:
-    # run once to compute and save trait-set-level features
-    df_jass_training.to_csv('../inputs/traitset_jass_CVtraining{}-newSUMMARY_remove-nan.tsv'.format(i),sep='\t')
-    df_jass_test.to_csv('../inputs/traitset_jass_CVtest{}-newSUMMARY_remove-nan.tsv'.format(i),sep='\t')
-    
     # read the saved files
     df_jass_training = pd.read_csv('../inputs/traitset_jass_CVtraining{}-newSUMMARY_remove-nan.tsv'.format(i),delimiter='\t')
     df_jass_test = pd.read_csv('../inputs/traitset_jass_CVtest{}-newSUMMARY_remove-nan.tsv'.format(i),delimiter='\t')
-- 
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