From 5cfcaf278297339402d6fd1bee54b3d933a39d53 Mon Sep 17 00:00:00 2001 From: Yuka Suzuki <yuka.suzuki@pasteur.fr> Date: Mon, 15 Jan 2024 11:23:27 +0100 Subject: [PATCH] removed two read_csv lines that are not necessary --- Regression_analysis/scripts/5f-cross_validation_linear.py | 4 ---- 1 file changed, 4 deletions(-) diff --git a/Regression_analysis/scripts/5f-cross_validation_linear.py b/Regression_analysis/scripts/5f-cross_validation_linear.py index c485f73..90886a2 100644 --- a/Regression_analysis/scripts/5f-cross_validation_linear.py +++ b/Regression_analysis/scripts/5f-cross_validation_linear.py @@ -42,10 +42,6 @@ cor_p_train = [] cor_p_val = [] df_jass_all = pd.DataFrame() for i in [2,3,4,5,6]: - # run once to compute and save trait-set-level features - df_jass_training.to_csv('../inputs/traitset_jass_CVtraining{}-newSUMMARY_remove-nan.tsv'.format(i),sep='\t') - df_jass_test.to_csv('../inputs/traitset_jass_CVtest{}-newSUMMARY_remove-nan.tsv'.format(i),sep='\t') - # read the saved files df_jass_training = pd.read_csv('../inputs/traitset_jass_CVtraining{}-newSUMMARY_remove-nan.tsv'.format(i),delimiter='\t') df_jass_test = pd.read_csv('../inputs/traitset_jass_CVtest{}-newSUMMARY_remove-nan.tsv'.format(i),delimiter='\t') -- GitLab