diff --git a/README.md b/README.md index 6d2df2ad5e0aad11f9ab687d6993d0f900d1f3f8..1c3371f712a5718ff056f009203b8023dcbd557d 100644 --- a/README.md +++ b/README.md @@ -26,8 +26,8 @@ Scripts and data used in the analysis and visualisation in the manuscript ``Trai | [Column names] 'Region': Independent region (loci), | 'n_associated_JASS': out of 1776 traitsets containing GIANT_BMI, how many times the region was associated by JASS while not associated by GIANT_BMI. | 'n_associated_JASS_corrected': same as 'n_associated_JASS' except that the significance by JASS is evaluated by q-value (p-value x 1776). - | 'P_small_gwas': P-value in the smaller univariate GWAS (GIANT_BMI). - | 'min_P_jass_joint': minimum P-value of the region by JASS across 1776 traitsets with GIANT_BMI + | 'P_small_gwas': P-value in the smaller univariate GWAS (GIANT_BMI). (It's the minimum across SNPs in the same region.) + | 'min_P_jass_joint': minimum P-value of the region by JASS across 1776 traitsets with GIANT_BMI. -1 if the region is associated by the small univ BMI GWAS. | 'P_univ_large_gwas': P-value in the larger univariate GWAS. | 'evaluate': comparison between JASS and large GWAS results. | 'JASS': whether JASS detected the region as significant.