From c8577f4337c787845e44f28de1430354de1eb9c9 Mon Sep 17 00:00:00 2001
From: Yuka Suzuki <yuka.suzuki@pasteur.fr>
Date: Mon, 15 Jan 2024 17:37:02 +0100
Subject: [PATCH] updated

---
 README.md | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/README.md b/README.md
index 6d2df2a..1c3371f 100644
--- a/README.md
+++ b/README.md
@@ -26,8 +26,8 @@ Scripts and data used in the analysis and visualisation in the manuscript ``Trai
     |            [Column names] 'Region': Independent region (loci), 
     |				'n_associated_JASS': out of 1776 traitsets containing GIANT_BMI, how many times the region was associated by JASS while not associated by GIANT_BMI.
     |				'n_associated_JASS_corrected': same as 'n_associated_JASS' except that the significance by JASS is evaluated by q-value (p-value x 1776).
-    |				'P_small_gwas': P-value in the smaller univariate GWAS (GIANT_BMI).
-    |				'min_P_jass_joint': minimum P-value of the region by JASS across 1776 traitsets with GIANT_BMI
+    |				'P_small_gwas': P-value in the smaller univariate GWAS (GIANT_BMI). (It's the minimum across SNPs in the same region.)
+    |				'min_P_jass_joint': minimum P-value of the region by JASS across 1776 traitsets with GIANT_BMI. -1 if the region is associated by the small univ BMI GWAS.
     |				'P_univ_large_gwas': P-value in the larger univariate GWAS.
     |				'evaluate': comparison between JASS and large GWAS results.
     |				'JASS': whether JASS detected the region as significant.
-- 
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