diff --git a/raiss/__main__.py b/raiss/__main__.py index 75c3d5ec32217a811a92fa68f9915baaf7549164..18365d3ca92ce01f6809bcbd6aff8fda892814dd 100644 --- a/raiss/__main__.py +++ b/raiss/__main__.py @@ -1,5 +1,6 @@ import argparse import pandas as pd +import sys from raiss.filter_format_output import filter_output from raiss.imputation_launcher import ImputationLauncher from raiss.pipes import save_chromosome_imputation @@ -47,12 +48,6 @@ def add_chromosome_imputation_argument(): return(parser) def main(): - parser = add_chromosome_imputation_argument() - args = parser.parse_args() - args.func(args) - - -if __name__=="__main__": print("", file=sys.stderr) print(" ******* ******* ******* ******* *******", file=sys.stderr) print(" ** ** ** ** *** ** **", file=sys.stderr) @@ -63,6 +58,13 @@ if __name__=="__main__": print(" ** ** ** ** ******* ******* *******", file=sys.stderr) print("", file=sys.stderr) print("", file=sys.stderr) + parser = add_chromosome_imputation_argument() + args = parser.parse_args() + args.func(args) + + +if __name__=="__main__": + main()