diff --git a/SHINY_APP.R b/SHINY_APP.R index 0a3a99c8298c637e6bf3e0bb6bf8ae85ee3240a5..53f5381fa8a2b221c32ee2c73b4cdf169e8a7b71 100644 --- a/SHINY_APP.R +++ b/SHINY_APP.R @@ -56,7 +56,7 @@ ui <- fluidPage( p("The Pv SeroTAT Tool has been developed by Ivo Mueller's research groups at the Institut Pasteur and Walter and Eliza Hall Institut of Medical Research. The tool is a patented diagnostic test based on validated serological markers of recent",tags$em("Plasmodium vivax")," infections and hypnozoite carriage. The tool uses machine learning classification algorithms (Random Forest (RF) and Support Vector Machine (SVM)) to predict sero-positivity with varying performance."), p("Validation of this tool using Random Forest can be found in the", a("Nature Medicine Publication", href="https://www.nature.com/articles/s41591-020-0841-4")), p("Please contact on how to cite this tool in publications."), - p(em("Follow steps 1 - 6 to process Luminex MFI or Relative Antibody Unit (RAU) data and run the diagnostic test.")), + p(em("Follow steps 1 - 6 to process Luminex/BioPlex MFI or Relative Antibody Unit (RAU) data and run the diagnostic test.")), hr()), tabPanel("Biomarkers of exposure", br(), @@ -216,7 +216,7 @@ ui <- fluidPage( fileInput("MFI_file", h5("4.1 Load raw MFI file (required)"), accept = c(".csv", ".xlsx")), - helpText("Note: a (.csv) or (.xlsx) file of raw outputs of the Luminex-MagPix machine. + helpText("Note: a (.csv) or (.xlsx) file of raw outputs of the Luminex-MagPix or BioPlex machine. If you encounter errors when loading a (.csv) file, convert it to (.xlsx) in Excel and load the (.xlsx) file instead.")), conditionalPanel("input.radio_data == 1", textInput("MFI_num_antigens",