From 280f935f59fa6fa59460eb559100694149efddc7 Mon Sep 17 00:00:00 2001
From: Tru Huynh <tru@pasteur.fr>
Date: Mon, 17 Jul 2017 19:02:05 +0200
Subject: [PATCH] update version
---
ISB2017/installation_notes/dynamo.md | 12 +++----
.../v-1.1.286_MCR-9.2.0_GLNXA64_withMCR | 34 +++++++++++++++++++
2 files changed, 40 insertions(+), 6 deletions(-)
create mode 100644 ISB2017/modulefiles/dynamo/v-1.1.286_MCR-9.2.0_GLNXA64_withMCR
diff --git a/ISB2017/installation_notes/dynamo.md b/ISB2017/installation_notes/dynamo.md
index c8f7809..dd946ac 100644
--- a/ISB2017/installation_notes/dynamo.md
+++ b/ISB2017/installation_notes/dynamo.md
@@ -1,13 +1,13 @@
-# Download dynamo-v-1.1.272_MCR-9.2.0_GLNXA64_withMCR.tar
+# Download dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR.tar
-- from https://drive.google.com/uc?export=download&confirm=DTUM&id=0B_T9apWxsZjMOGN3NkVnV3FNLTQ
+- from https://drive.google.com/uc?id=0B_T9apWxsZjMTEszNGpvVHVuYnM
- requires openmpi-devel
```
-mkdir /ISB2017/dynamo-v-1.1.272_MCR-9.2.0_GLNXA64_withMCR
-tar -C /ISB2017/dynamo-v-1.1.272_MCR-9.2.0_GLNXA64_withMCR -xf dynamo-v-1.1.272_MCR-9.2.0_GLNXA64_withMCR.tar
-cd /ISB2017/dynamo-v-1.1.272_MCR-9.2.0_GLNXA64_withMCR
-export DYNAMO_ROOT=/ISB2017/dynamo-v-1.1.272_MCR-9.2.0_GLNXA64_withMCR
+mkdir /ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR
+tar -C /ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR -xf dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR.tar
+cd /ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR
+export DYNAMO_ROOT=/ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR
source ${DYNAMO_ROOT}/dynamo_activate_linux.sh
source ${DYNAMO_ROOT}/dynamo_activate_linux_shipped_MCR.sh
module add mpi
diff --git a/ISB2017/modulefiles/dynamo/v-1.1.286_MCR-9.2.0_GLNXA64_withMCR b/ISB2017/modulefiles/dynamo/v-1.1.286_MCR-9.2.0_GLNXA64_withMCR
new file mode 100644
index 0000000..2450189
--- /dev/null
+++ b/ISB2017/modulefiles/dynamo/v-1.1.286_MCR-9.2.0_GLNXA64_withMCR
@@ -0,0 +1,34 @@
+#%Module1.0
+# /ISB2017/modulefiles/dynamo/1.1.286_MCR-9.2.0_GLNXA64_withMCR
+# dynamo-1.1.286_MCR-9.2.0_GLNXA64_withMCR
+proc ModulesHelp { } {
+ global dotversion
+ puts stderr "\tdynamo-1.1.286_MCR-9.2.0_GLNXA64_withMCR module"
+}
+module-whatis "adds `/ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR//bin' to your PATH environment variable"
+
+setenv DYNAMO_ROOT /ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR
+prepend-path PATH /ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR//matlab/bin
+prepend-path PATH /ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR//matlab/src
+prepend-path PATH /ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR//cuda/bin
+prepend-path PATH /ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR//mpi
+prepend-path PATH /ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR//examples
+prepend-path PATH /ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR//doc
+
+prepend-path LD_LIBRARY_PATH /ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR//MCRLinux/runtime/glnxa64
+prepend-path LD_LIBRARY_PATH /ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR//MCRLinux/bin/glnxa64
+prepend-path LD_LIBRARY_PATH /ISB2017/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR//MCRLinux/sys/os/glnxa64
+
+eval set [ array get env USER ]
+set workdir /tmp/$USER/dynamo-v-1.1.253_MRC-9.2.0_GLNXA64_withMCR
+
+# create directory if necessary
+if [ module-info mode load ] {
+ if { ! [ file exists $workdir ] } {
+ file mkdir $workdir
+ }
+}
+
+setenv MCR_CACHE_ROOT /tmp/$USER/dynamo-v-1.1.286_MCR-9.2.0_GLNXA64_withMCR
+module add mpi/openmpi-x86_64
+
--
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