Merge branch 'develop' of https://github.com/kjolley/BIGSdb into develop

lib/BIGSdb/CombinationQueryPage.pm

@@ -405,6 +405,7 @@ sub _add_query_ordering {
 			$$qry_ref .= "$profile_id_field $dir;";
 		} elsif ( $self->{'datastore'}->is_locus($order_field) ) {
 			my $locus_info = $self->{'datastore'}->get_locus_info($order_field);
+			$order_field = $self->{'datastore'}->get_scheme_warehouse_locus_name( $scheme_id, $order_field );
 			$order_field =~ s/'/_PRIME_/gx;
 			$$qry_ref .=
 			  $locus_info->{'allele_id_format'} eq 'integer'

lib/BIGSdb/ConfigCheckPage.pm

@@ -218,7 +218,7 @@ sub _check_scheme_databases {
 		}
 		say q(</table></div></div>);
 	} else {
-		say q(<p>No schemes with databases defined.</p>);
+		say q(<p>No schemes with databases defined.</p></div>);
 	}
 	return;
 }

lib/BIGSdb/Plugins/SequenceExport.pm

@@ -257,7 +257,7 @@ sub _run_job_profiles {
 
 	if ( $params->{'align'} && @$ids > $limit ) {
 		my $message_html =
-		  q(<p class="statusbad">Please note that output is limited to the first $limit records.</p>\n);
+		  qq(<p class="statusbad">Please note that output is limited to the first $limit records.</p>\n);
 		$self->{'jobManager'}->update_job_status( $job_id, { message_html => $message_html } );
 	}
 	my $progress = 0;

lib/BIGSdb/Scheme.pm

@@ -38,7 +38,6 @@ sub _initiate {
 	my $sql = $self->{'db'}->prepare('SELECT locus,index FROM scheme_warehouse_indices WHERE scheme_id=?');
 	if ( $self->{'dbase_table'} =~ /scheme_(\d+)$/x ) {
 		my $scheme_id = $1;
-		$logger->error($scheme_id);
 		eval { $sql->execute($scheme_id); };
 		$logger->error($@) if $@;
 		my $data = $sql->fetchall_arrayref;