From 50a1bce78a58a52490a4561497cb59ab89dbd3e4 Mon Sep 17 00:00:00 2001
From: Veronique Legrand <vlegrand@pasteur.fr>
Date: Thu, 1 Dec 2016 17:47:47 +0100
Subject: [PATCH] fixed bug: quality score threshold for nucleotide was not
initialized when provided by the user
---
src/ROCKparams.h | 1 +
1 file changed, 1 insertion(+)
diff --git a/src/ROCKparams.h b/src/ROCKparams.h
index a970a5f..511d9c2 100644
--- a/src/ROCKparams.h
+++ b/src/ROCKparams.h
@@ -70,6 +70,7 @@ public:
parms.kappa=50;
parms.kappa_prime=0;
parms.lambda=0;
+ parms.nucl_score_threshold=0;
verbose_mode=0;
cms_size=0;
expected_collision_proba=0.0;
--
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