diff --git a/src/unit_test_cms.cpp b/src/unit_test_cms.cpp index 47349ceede31231c68da185a94b5375add5fcbae..50093df18f6fc231e21cefee5df42f7d0abaebbd 100644 --- a/src/unit_test_cms.cpp +++ b/src/unit_test_cms.cpp @@ -12,6 +12,7 @@ using namespace std; #include "CountMinSketch.hpp" +#include "main_utils.h" void test_CMS(int lambda,int kappa,int kappa_prime) { @@ -78,6 +79,16 @@ int main(int argc, char **argv) { cout<<"sizeof(int)="<<sizeof(int)<<endl; cout<<"sizeof(long)="<<sizeof(long)<<endl; + cout<<"checking that your machine has enough RAM to run test"<<endl; + unsigned long ram=getNodePhysMemory(); + + if (ram<5) { + cout<<"!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!"<<endl; + cout<<" WARNING: skipping this test, it requires at least 4 gigabytes of RAM to run."<<endl; + cout<<"!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!"<<endl; + return 0; + } + cout<<"testing CMS with lambda="<<lambda<<endl; test_CMS(lambda,kappa,kappa_prime); // Finally using C arrays (maps implied storing hash keys : 4 Bytes per k_mer overhead) but each array is of size INT_MAX...