diff --git a/README.md b/README.md index 453731eaa47b6c16a8a8ec61c3990a295bd05d61..950e44dc3793f2c76c6eef824649935d7724d9c4 100755 --- a/README.md +++ b/README.md @@ -27,8 +27,8 @@ genome and align them on the bacterial genome using the same mapping function. T The previous PhageTerm program (single phage analysis only) is still available at https://sourceforge.net/projects/phageterm/ (for versions <3.0.0) -A Galaxy wrapper version is also available for the previous version at https://galaxy.pasteur.fr (only for the first version PhageTerm). -PhageTermVirome is not implemented on Galaxy yet). +A Galaxy wrapper version is also available for the first version of PhageTerm at https://galaxy.pasteur.fr. +PhageTermVirome is not implemented on Galaxy yet. Since version 4.1, PhageTerm can work in 2 modes: - the usual mono machine mode (parallelization on several cores on the same machine). @@ -62,8 +62,8 @@ version 4.2 and higher work with python 3.9 up to python 3.13. export SKLEARN_ALLOW_DEPRECATED_SKLEARN_PACKAGE_INSTALL=True -- download the .tar.gz file containing PhageTermVirome latest vesion from here : https://test.pypi.org/project/phagetermvirome/#files -and unzip it. This should create a "phagetermvirome-4.2" directory. Go into it and type: +- download the .tar.gz file containing PhageTermVirome latest vesion from here : https://pypi.org/project/phagetermvirome/#files +and unzip it. This should create a "phagetermvirome-4.X" directory. Go into it and type: poetry install