From 5902dbb7e5c10b82d8895f57e9faed5083f197c3 Mon Sep 17 00:00:00 2001
From: Veronique Legrand <vlegrand@pasteur.fr>
Date: Thu, 19 Oct 2023 10:10:22 +0200
Subject: [PATCH] stable version 4.1.2

---
 NEWS.txt       | 12 ++++++++++++
 README.md      |  2 +-
 pyproject.toml |  2 +-
 3 files changed, 14 insertions(+), 2 deletions(-)

diff --git a/NEWS.txt b/NEWS.txt
index d505120..de95315 100644
--- a/NEWS.txt
+++ b/NEWS.txt
@@ -1,6 +1,18 @@
 VERSION
 =======
 
+Version 4.1.2
+
+What's new in version 4.1.2?
+
+In this version we integrated a fix suggested by Wei Shen.
+There was a regression in version 3.0 and upper: the rearranged phage sequence was no more trimmed.
+This is now fixed thanks to Wei.
+
+
+VERSION
+=======
+
 Version 4.1.1
 
 What's new in version 4.1.1?
diff --git a/README.md b/README.md
index 967c9a8..b12ad29 100755
--- a/README.md
+++ b/README.md
@@ -7,7 +7,7 @@ PhageTerm.py - run as command line in a shell
 # VERSION
 # =======
 
-Version 4.1.1
+Version 4.1.2
 Compatible with python 3.9 up to 3.13
 
 
diff --git a/pyproject.toml b/pyproject.toml
index f944969..ec1a5a5 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "phagetermvirome"
-version = "4.2b"
+version = "4.1.2"
 description = "Using sequencing bias to identify phages terminii and phage genome packaging."
 authors = ["Marc Monot <marc.monot@pasteur.fr>",
            "Julian Garneau <julian.garneau@unil.ch>",
-- 
GitLab