diff --git a/phagetermvirome/IData_handling.py b/phagetermvirome/IData_handling.py index b75abe58db871d23cd9423cfe1953715a9aea209..ec4cbf4a40991645e86350fe7befe946c80c68da 100755 --- a/phagetermvirome/IData_handling.py +++ b/phagetermvirome/IData_handling.py @@ -294,8 +294,10 @@ def totReads(filin): filein = open(filin, 'r') line = 0 with io.BufferedReader(filein, buffer_size=bufsize) as buffered_f: + for l in buffered_f: + line+=1 #while filein.readline(): - line += 1 + # line += 1 seq = float(round(line / 4)) filein.close() end_t = time.perf_counter_ns()