@@ -7,4 +7,4 @@ In the original version of phageterm, mapping reads than randomly choosing a map
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@@ -7,4 +7,4 @@ In the original version of phageterm, mapping reads than randomly choosing a map
I first thought to that by I didn't find anything relevant except compiling the regexp element which is not of any use since it changes with each read.
I first thought to that by I didn't find anything relevant except compiling the regexp element which is not of any use since it changes with each read.
* use another python package with special text searching algorithms.
* use another python package with special text searching algorithms.
I thought of the Knuth Morris algorithm
I thought of the Knuth Morris Pratt algorithm which I found implemented in the tryalgo package.
