Commit b1bbf1c6 authored by Yoann Dufresne's avatar Yoann Dufresne
Browse files

snakefile update

parent 19fc7038
...@@ -3,7 +3,7 @@ pbar = ProgressBar() ...@@ -3,7 +3,7 @@ pbar = ProgressBar()
OUTDIR="snake_experiments" if "outdir" not in config else config["outdir"] OUTDIR="snake_experiments" if "outdir" not in config else config["outdir"]
trials=1 trials=1 if "trials" not in config else config["trials"]
N=[1000] if "n" not in config else config["n"] # Number of molecule to simulate N=[1000] if "n" not in config else config["n"] # Number of molecule to simulate
D=[10] if "d" not in config else config["d"] # Average coverage of each molecule D=[10] if "d" not in config else config["d"] # Average coverage of each molecule
M=[2, 3] if "m" not in config else config["m"] # Average number of molecule per barcode M=[2, 3] if "m" not in config else config["m"] # Average number of molecule per barcode
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