From b5b9bdd4328a01a33b4f3fa1cfe557c6316919ee Mon Sep 17 00:00:00 2001
From: rchikhi <rayan.chikhi@univ-lille1.fr>
Date: Tue, 19 Feb 2019 11:33:54 +0100
Subject: [PATCH] added the 100_5_2 example graph with a focus on the neighbors
of the barcode containing molecules 43,95
---
...00_5_2-neighbors_of_molecule_43_95.graphml | 199 +++++++
...-neighbors_of_molecule_43_95.graphml.gephi | Bin 0 -> 5461 bytes
data/simulated_barcodes_100_5_2.gexf | 406 ++++++++++++++
data/simulated_molecules_100_5.graphml | 495 ++++++++++++++++++
4 files changed, 1100 insertions(+)
create mode 100644 data/100_5_2-neighbors_of_molecule_43_95.graphml
create mode 100644 data/100_5_2-neighbors_of_molecule_43_95.graphml.gephi
create mode 100644 data/simulated_barcodes_100_5_2.gexf
create mode 100644 data/simulated_molecules_100_5.graphml
diff --git a/data/100_5_2-neighbors_of_molecule_43_95.graphml b/data/100_5_2-neighbors_of_molecule_43_95.graphml
new file mode 100644
index 0000000..4ad4217
--- /dev/null
+++ b/data/100_5_2-neighbors_of_molecule_43_95.graphml
@@ -0,0 +1,199 @@
+<?xml version='1.0' encoding='utf-8'?>
+<graphml xmlns="http://graphml.graphdrawing.org/xmlns" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
+ <key attr.name="id" attr.type="string" for="edge" id="d4" />
+ <key attr.name="contigs" attr.type="string" for="edge" id="d3" />
+ <key attr.name="mi" attr.type="long" for="node" id="d2" />
+ <key attr.name="label" attr.type="string" for="node" id="d1" />
+ <key attr.name="mode" attr.type="string" for="graph" id="d0" />
+ <graph edgedefault="undirected">
+ <node id="7:94_47-MI1">
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+ </node>
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diff --git a/data/100_5_2-neighbors_of_molecule_43_95.graphml.gephi b/data/100_5_2-neighbors_of_molecule_43_95.graphml.gephi
new file mode 100644
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diff --git a/data/simulated_barcodes_100_5_2.gexf b/data/simulated_barcodes_100_5_2.gexf
new file mode 100644
index 0000000..7430850
--- /dev/null
+++ b/data/simulated_barcodes_100_5_2.gexf
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GitLab