Commits · cb354bcb9837c5e67d50002e1fec037a96020248 · Yoann DUFRESNE / linked reads molecule ordering

25 May, 2020 3 commits
- remove last dependencies to barcode graph into lcp graphs · e268c918
  Yoann Dufresne authored May 25, 2020
  
  e268c918
- reduction + evaluation ok · 2cb22aca
  Yoann Dufresne authored May 25, 2020
  
  2cb22aca
- remove dependance to barcode graph in lcp graph loading · c6ef39a8
  Yoann Dufresne authored May 25, 2020
  
  c6ef39a8
18 May, 2020 1 commit
- figures update · 45503263
  Yoann Dufresne authored May 18, 2020
  
  45503263
17 May, 2020 1 commit
- bugfix d2_algo · ed49295c
  Yoann Dufresne authored May 17, 2020
  
  ed49295c
16 May, 2020 3 commits
- barcode total ordering computing · 15906856
  Yoann Dufresne authored May 16, 2020
  
  15906856
- path search refactoring · 678f0477
  Yoann Dufresne authored May 16, 2020
  
  678f0477
- refactor solution class · 5fd16e32
  Yoann Dufresne authored May 16, 2020
  
  5fd16e32
14 May, 2020 8 commits
- add max coverage value to the print · cb9177b2
  Yoann Dufresne authored May 14, 2020
  
  cb9177b2
- revert wrong opti · ff5bf7f0
  Yoann Dufresne authored May 14, 2020
  
  ff5bf7f0
- revert wrong opti · 9f16d4bd
  Yoann Dufresne authored May 14, 2020
  
  9f16d4bd
- greedy optimizations · 5091e494
  Yoann Dufresne authored May 14, 2020
  
  5091e494
- add third sorting critera · d1ff2f33
  Yoann Dufresne authored May 14, 2020
  
  d1ff2f33
- add third sorting critera · 8eb083f4
  Yoann Dufresne authored May 14, 2020
  
  8eb083f4
- naive branch & bound · eeab1f7a
  Yoann Dufresne authored May 14, 2020
  
  eeab1f7a
- ../deconvolution/main/d2_to_path_simple.py · 5183ab17
  Rayan CHIKHI authored May 14, 2020
  
  5183ab17
11 May, 2020 1 commit
- bad greedy path · a2baf0b0
  Yoann Dufresne authored May 11, 2020
  
  a2baf0b0
29 Apr, 2020 1 commit
- optimization for divergence computation · 061f4092
  Yoann Dufresne authored Apr 29, 2020
  
  061f4092
28 Apr, 2020 1 commit
- clique graph tests · 498df34a
  Yoann Dufresne authored Apr 28, 2020
  
  498df34a
17 Apr, 2020 1 commit
- simplification of d2 construction · 2122230c
  Yoann Dufresne authored Apr 17, 2020
  
  2122230c
10 Apr, 2020 1 commit
- add debug graph outputing fort mwm · e6072e12
  Yoann Dufresne authored Apr 10, 2020
  
  e6072e12
13 Feb, 2020 1 commit
- bugfix: fake d2 generation due to variable collisions · 59ef6b96
  Yoann Dufresne authored Feb 13, 2020
  
  59ef6b96
14 Jan, 2020 1 commit
- index and clique modification · 02f87907
  Yoann Dufresne authored Jan 14, 2020
  
  02f87907
13 Jan, 2020 2 commits
- Snakefile tests · af08126f
  Yoann Dufresne authored Jan 13, 2020
  
  af08126f
- refactoring of the code to match package tree · f78f16f2
  Yoann Dufresne authored Jan 13, 2020
  
  f78f16f2
10 Jan, 2020 1 commit
- refactor index · dd190fee
  Yoann Dufresne authored Jan 10, 2020
  
  dd190fee
09 Jan, 2020 1 commit
- refactor directories · 5e05d845
  Yoann Dufresne authored Jan 09, 2020
  
  5e05d845