diff --git a/src/zolfa/nd2reader/parser.py b/src/zolfa/nd2reader/parser.py index 45fcde16ef6ac2550f1c8e2f0ca77aa283aff5cf..60b2d141c82f53268c1037a69c39f110b5544e83 100644 --- a/src/zolfa/nd2reader/parser.py +++ b/src/zolfa/nd2reader/parser.py @@ -277,6 +277,7 @@ class Parser(object): """ return {channel: n for n, channel in enumerate(self.metadata["channels"])} + # TODO: create missing test cases for slices def _get_raw_slice_data(self, xywh, image_group_number, channel, height, width): """Reads the raw bytes and the timestamp of a rectangular slice of an image. @@ -322,7 +323,7 @@ class Parser(object): # Read ROI: row-by-row image_start_pos = chunk_location + 16 + relative_offset + 8 - line_bytemask = np.zeros(size_c, dtype=np.bool) + line_bytemask = np.zeros(size_c, dtype=bool) line_bytemask[channel] = True line_bytemask = np.tile(line_bytemask.repeat(2),w)