p("SHAMAN is available for R=3.1.2. Packrat framework installation allow an easy installation of all the dependencies. Of note, raw data submission is not possible with this version. First, install R 3.1.2 as local install as follow:",style="font-family: 'times'; font-si16pt"),
wellPanel(style='width: 150%; word-wrap: break-word;',"# Install R 3.1.2",br(),
mainPanel(div(style='max-width: 900px; word-wrap: break-word;',"# Install R 3.1.2",br(),
"wget https://pbil.univ-lyon1.fr/CRAN/src/base/R-3/R-3.1.2.tar.gz && tar -zxf R-3.1.2.tar.gz",br(),"mkdir /some/location/r_bin",br(),
"cd R-3.1.2/ && ./configure --prefix=/some/location/r_bin/ && make && make install && /some/location/r_bin/bin/R",br(),
p("This installation will not interact with other R installation. Then, you can install shaman with packrat:",a("here",target="_blank",href="shamanapp.R"),"and executed as following :"),
p("SHAMAN is available for R=3.1.2. A more recent installation of R will break the differential abundance interface. The installation, download and execution can all be performed with a small R script:",style="font-family: 'times'; font-si16pt"),
br(),"# Install dependencies,",br(),"# download last version from github,",br(),"# and run SHAMAN in one command:",br(),"runGitHub('aghozlane/shaman')"),
br(),"# Install dependencies,",br(),"# download last version from github,",br(),"# and run SHAMAN in one command:",br(),"runGitHub('aghozlane/shaman')"),width=9,class="mainwell"),
p("This script can also be dowloaded",a("here",target="_blank",href="shamanapp.R"),"and executed as following :"),
p("Of note, contribution to SHAMAN code are always welcome and can be performed with the",a("github deposit.",href="https://github.com/aghozlane/shaman")))