updated pom to v2.0.0-a.1, fix classes accordingly to new architecture, updated .gitignore

.gitignore

-.idea/
+/build*
+/workspace
+setting.xml
+release/
 target/
-.settings/
+!.mvn/wrapper/maven-wrapper.jar
+!**/src/main/**/target/
+!**/src/test/**/target/
+icy.log
+
+### IntelliJ IDEA ###
+.idea/
+*.iws
 *.iml
-.project
+*.ipr
+
+### Eclipse ###
+.apt_generated
 .classpath
-**/.DS_Store
+.factorypath
\ No newline at end of file
+.project
+.settings
+.springBeans
+.sts4-cache
+
+### NetBeans ###
+/nbproject/private/
+/nbbuild/
+/dist/
+/nbdist/
+/.nb-gradle/
+build/
+!**/src/main/**/build/
+!**/src/test/**/build/
+
+### VS Code ###
+.vscode/
+
+### Mac OS ###
+**/.DS_Store
+Icon?
\ No newline at end of file

pom.xml

@@ -8,12 +8,12 @@
     <parent>
         <artifactId>pom-icy</artifactId>
         <groupId>org.bioimageanalysis.icy</groupId>
-        <version>2.2.0</version>
+        <version>3.0.0-a.1</version>
     </parent>
 
     <!-- Project Information -->
     <artifactId>distance-profiler</artifactId>
-    <version>2.0.0</version>
+    <version>2.0.0-a.1</version>
 
     <name>Distance Profiler</name>
     <description>
@@ -56,34 +56,33 @@
 
     <!-- List of project's dependencies -->
     <dependencies>
-        <!-- The EzPlug library, simplifies writing UI for Icy plugins. -->
         <dependency>
             <groupId>org.bioimageanalysis.icy</groupId>
             <artifactId>ezplug</artifactId>
         </dependency>
-
         <dependency>
             <groupId>org.bioimageanalysis.icy</groupId>
-            <artifactId>track-manager</artifactId>
+            <artifactId>spot-detection-utilities</artifactId>
         </dependency>
-
         <dependency>
             <groupId>org.bioimageanalysis.icy</groupId>
-            <artifactId>workbooks</artifactId>
+            <artifactId>track-manager</artifactId>
         </dependency>
-
         <dependency>
             <groupId>org.bioimageanalysis.icy</groupId>
             <artifactId>vecmath</artifactId>
         </dependency>
+        <dependency>
+            <groupId>org.bioimageanalysis.icy</groupId>
+            <artifactId>workbooks</artifactId>
+        </dependency>
     </dependencies>
 
     <!-- Icy Maven repository (to find parent POM) -->
     <repositories>
         <repository>
             <id>icy</id>
-            <name>Icy's Nexus</name>
-            <url>https://icy-nexus.pasteur.fr/repository/Icy/</url>
+            <url>https://nexus-icy.pasteur.cloud/repository/icy/</url>
         </repository>
     </repositories>
 </project>
\ No newline at end of file

src/main/java/plugins/adufour/trackprocessors/DistanceProfiler.java

 /*
- * Copyright (c) 2010-2023. Institut Pasteur.
+ * Copyright (c) 2010-2024. Institut Pasteur.
  *
  * This file is part of Icy.
  * Icy is free software: you can redistribute it and/or modify
@@ -18,10 +18,11 @@
 
 package plugins.adufour.trackprocessors;
 
-import icy.gui.dialog.ConfirmDialog;
 import org.apache.poi.ss.usermodel.Row;
 import org.apache.poi.ss.usermodel.Sheet;
 import org.apache.poi.ss.usermodel.Workbook;
+import org.bioimageanalysis.icy.extension.plugin.annotation_.IcyPluginName;
+import org.bioimageanalysis.icy.gui.dialog.ConfirmDialog;
 import plugins.adufour.vars.gui.swing.SwingVarEditor;
 import plugins.adufour.vars.lang.VarWorkbook;
 import plugins.fab.trackmanager.PluginTrackManagerProcessor;
@@ -36,6 +37,7 @@ import java.io.File;
 import java.io.FileOutputStream;
 import java.util.ArrayList;
 
+@IcyPluginName("Distance Profiler")
 public class DistanceProfiler extends PluginTrackManagerProcessor {
     public DistanceProfiler() {
         setName("Relative distance between detections");