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MCIB3D

Project ID: 3549
Name Last commit Last update
.github/workflows
.ipynb_checkpoints
.vscode
bin_stitched
droplet_growth
nd2_combine
nd2tif
segment
tests
.coverage
.gitignore
.gitlab-ci.yml
23_01_2020_stats.csv
96 wells.ipynb
Dockerfile
Multiwell-2021-06-22-recount.ipynb
Multiwell-growth-rate-10-June-2021-2ng.ipynb
Multiwell-growth-rate-18-may-2021.ipynb
Multiwell-growth-rate-25-may-2021.ipynb
Multiwell-june-july-2021-probs.ipynb
Multiwell_MIC_17-June-2021_0-10ng_6e-4.ipynb
Multiwell_MIC_22-June-2021_0-10ng_5x-napari.ipynb
Multiwell_MIC_22-June-2021_0-10ng_5x.ipynb
Multiwell_MIC_28-June-2021_0-15ng.ipynb
Multiwell_photobleaching.ipynb
Untitled.ipynb
bacteria-paper-figure.ipynb
cipro-0228-stats.ipynb
cipro-0303-stats.ipynb
multiwell-0228.ipynb
multiwell-0609.ipynb
multiwell-0610.ipynb
multiwell-0805.ipynb
multiwell-0807.ipynb
multiwell-0811.ipynb
multiwell-0813.ipynb
multiwell-plot-curves.ipynb
multiwell.ipynb
multiwell_MIC_counts_20201103.ipynb
multiwell_cell_number_hists.ipynb
multiwell_feb_5-17_align.ipynb
multiwell_feb_5-17_measure.ipynb
multiwell_registration-20201106.ipynb
multiwell_registration-20201109.ipynb
multiwell_registration-20201112.ipynb
new_segmentation.ipynb
organoid_shape_stats-23_01_2020.ipynb
organoid_shape_stats_cell_number_14022020.ipynb
rates_feb.csv
rates_feb_max_proj.csv
readme.md
requirements.txt
segment-Fish-20210629
segment.ipynb
segment_AggreWell_BRA.ipynb
segment_MuviCyte.ipynb
segment_dars_chip_wells_plots.ipynb
segment_kinetic-chip.ipynb
segment_kinetic.ipynb
segment_muvicyte_all.ipynb
segment_neurons_czi.ipynb
segment_neurons_czi_2.ipynb
segment_neurons_czi_3.ipynb
segment_neurons_czi_Large_chips-nd2.ipynb
segment_neurons_czi_Large_chips.ipynb
segment_rgb.ipynb
segment_rgb_1-2_8001.ipynb
segment_rgb_3001.ipynb
segment_rgb_SUMO3-D2-D5.ipynb
segment_rgb_SUMO4-D2-D5.ipynb
segment_viability.ipynb
setup.py
source_crops.ipynb
stats.csv
temp.tif
test_nd2_stitched.ipynb
tox.ini
workspace.code-workspace