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Icy is an open community platform for bioimage informatics

The TensorFlow library manager plugin. This plugin allows users to choose the TF version to be used on runtime

Spot detector plugin for Icy

Active Contours plugin for Icy

HK-Means plugin for Icy

Track Manager plugin for Icy

The snakeyaml library available for Icy

Bio-Formats library patched for Icy. The patch consist of replacing Apache Commons IO library by a newer version and also replacing org.json library with the custom version embedded into Micro-Manager to make it work properly.

Template to create new Icy plugin (POM file and base plugin class)

Toolbox to create and manipulate result tables with plug-ins and protocols, and export as text file or to your favorite spreadsheet software

Script Editor plugin for Icy

description

Display the colormap over the image using an overlay.

Building a supermatrix of characters from a set of multiple sequence alignments

Estimating a confidence value at each branch of a phylogenetic tree from a matrix of pairwise evolutionary distances

An Icy plugin made for random generation of crops on a given sequence

Icy plugin for applying median filter on 2D and 3D sequences

Fast removal of contaminating reads from FASTQ file(s)