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This Icy plugin allows to compute and display the histogram of a sequence, with a more accurate control on the histogram parameters. It also enables the computation of histograms on ROIs.

Inferring alien oligonucleotides (adapters, primers, ...) from FASTQ file

Smith-Waterman-based Average Nucleotide Identity

A collection of resources on yeast transcript annotations, based on published results.

Maestro Cluster documentation

Utilities to collapse reads in bam files to their 5' end

EzPlug plugin for Icy

Blocks plugin for Icy. Also known as "Protocols SDK" This plugin provide interfaces to make plugin compatible with Protocols(Graphical Programming).

Protocols (GUI part) plugin for Icy

Sequence blocks plugin for Icy. This plugin deliver a set of Sequence tools to be used with Protocols (Graphical Programming).

ROI blocks plugin for Icy. This plugin deliver a set of ROI tools to be used with Protocols (Graphical Programming).

Spot Tracking plugin for Icy

Spot Tracking Blocks plugin for Icy. This plugin brings Spot Tracking tools into Protocols (Graphical Programming)

Track Motion Profiler plugin for Icy. This plugin adds Motion Profiler and Motion Filter processors to Track Manager.