Parameter inference using filtered linear noise approximation algorithm for likelihood calculation.
Read Assignment, Mapping, and Phylogenetic Analysis in Real Time
A module handling basic fonctionnality needed in django project such as base.html using bootstrap, account settings, preferences management, ...
Cytoscape.js visualisation of PASTML trees
From experiences acquired developing https://gitlab.pasteur.fr/metagenomics/metagenedb, create a light version of it with FastAPI as a backend and SQLModel as ORM
This will contain the minimal necessary codes to reproduce the image analysis (BF and IF) from the preprint https://arxiv.org/abs/2303.17522
Python GUI to control an AOTF.
Converting Genbank files into EMBL-like files suitable for submission to ENA