Explore projects

This project contains the latest PhageTerm software source repository (multi machine version).

Utilities to make stats and plots from reads.

Some helpers for HTS data analyses.

compress nd2 files

PySLM is a multi channel Sound Level Meter software developed in python with a PyQt5 graphical interface

Utilities to collapse reads in bam files to their 5' end

Miscellaneous stuff to deal with Ribo-seq data.

Serratus project, read downloader using AWS Batch

Utilities to make a consensus from a sequence alignment.

Quality-aware fastq demultiplexer. The goal is to demultiplex fastq files where the barcode is contained in the read at a known position.

iPPI-DB - django application

import from github

version of gratin adapted for inference of fBM properties

metagenomics pipeline on maestro