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Protocols (GUI part) plugin for Icy

Sequence blocks plugin for Icy. This plugin deliver a set of Sequence tools to be used with Protocols (Graphical Programming).

MANOCCA test is based on covariance. This project implements MANOCCA, MANOVA and provides an simulation environment and an explainer.

Serratus project, read downloader using AWS Batch

A Fiji tool to detect, track and analyze cell-to-cell contacts.

First reported in Samassa et al., 2020, "Shigella impairs human T lymphocyte responsiveness by hijacking actin cytoskeleton dynamics and TCR vesicular trafficking"

A simple plugin to randomly assign colors to ROIs in sequences. Also available for protocols

Icy wrapper for the Apache Commons CSV library.

Computing the probability that a phylogenetic tree is the result of a Yule process

Course material for the part about R and RStudio of the PhD course.