Explore projects

Asia-Pacific ICEMER cohort ran in Madang (Papua New-Guinea) in early 2020. The purpose of this repository is to centralize R scripts and developments to streamline the data extraction and analysis.

Genome de novo assembly from raw paired-end FASTQ files

No code here, only artefacts, mostly to feed the CI with data

Region segmentation

Cropping reads to reach homogeneous composition among positions

General python code for analysis pipeline

Pytorch implementation of the Spline dist cell segmentation method