Explore projects

From experiences acquired developing https://gitlab.pasteur.fr/metagenomics/metagenedb, create a light version of it with FastAPI as a backend and SQLModel as ORM

Supplementary material for the paper: "Leishmania genome dynamics during environmental adaptation reveals strain-specific differences in gene copy number variation, karyotype instability, and telomeric amplification"

A python package to impute the SNP summary statistics from neighboring SNPs summary statistics by taking advantage of linkage desiquilibrium

Converting Genbank files into EMBL-like files suitable for submission to ENA

Utilities to collapse reads in bam files to their 5' end

Python script panel generator for VisPan software

Pipeline reconstructing the averaged dynamics of gene expression in the fly eye using the fixed samples.

Fast Fourier Transform Plugin for Icy

compress nd2 files