Explore projects

building forests of near-ML trees

Estimating standard descriptive statistics from FASTQ files

COG annotation of CDS

Fast greedy clustering of genomes based on minhash similarity

Assembling SSU

Translating and back-translating codon and amino-acid sequence files

Estimating a confidence value at each branch of a phylogenetic tree from a matrix of pairwise evolutionary distances

majority-rule consensus of ML phylogenetic trees

Computing the probability that a phylogenetic tree is the result of a Yule process

Finding Repeats Using BLAST