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This library contains the functions to convert TensorFlow 1 tensors into Icy sequences and viceversa. This library is compatible with TensorFlow versions up to 1.15

Creating an AGP file from a FASTA-formatted scaffold sequence file

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Jython library for Icy

This repo contains the script, model and parameters needed to train a StarDist model on the simulated dataset used in the ISBI Grand Challenge on Single-Particle Tracking.

Supplementary material for the paper: "Leishmania genome dynamics during environmental adaptation reveals strain-specific differences in gene copy number variation, karyotype instability, and telomeric amplification"

Gson library plugin for Icy

Tools to design and analyse CRISPRi experiments